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Journal articles Heterologous plastoquinone production using a newly identified O 2 ‐dependent cyanobacterial hydroxylase Morgane Roger-Margueritat, Margot Beltran, Juliette Schnoebelen, Laura Flandrin, Wafa Rezali, Eline Michel, Sophie S. Abby, Fabien Pierrel
FEBS Journal, 2025, ⟨10.1111/febs.70272⟩. ⟨hal-05302505⟩
Preprints, Working Papers, ... Microbial computing: review and perspectives Paul Ahavi, Audrey Le Gouellec, Jean-Loup Faulon
2025. ⟨hal-05281013⟩
Preprints, Working Papers, ... DNA methylation and immune infiltration mediate the impact of tobacco exposure on pancreatic adenocarcinoma outcome: a high-dimensional mediation analysis Florence Pittion, Elise Amblard, Emilie Devijver, Adeline Samson, Nelle Varoquaux, Magali Richard
2025. ⟨hal-05262669⟩
Conference papers Contribution of multiblock methods for predicting the severity of COVID-19 from clinical, biochemical and metabolomic data Marion Brandolini-Bunlon, Benoit B. Jaillais, Audrey Le Gouellec, Jean-Michel J. -M. Roger, Estelle Pujos-Guillot
Colloquium Chemiometricum Mediterraneum (CCM2025), Société Française de Statistiques - groupe Chimiométrie, Sep 2025, Porquerolles, France. ⟨hal-05265568⟩
Preprints, Working Papers, ... The Rechallenge Benefit Score: A Clinical Decision Tool for Patients Progressing After Immunotherapy Caroline Plazy, Mohamed Boussena, Linh Nguyen Phuong, Baptiste Assié Jean, Emmanuel Grolleau, Valerie Gounant, Nouha Chaabane, Chantal Decroisette, Eric Dansin, Hélène Babey, Catherine Daniel, Giroux Leprieur Etienne, David Planchard, Mariona Riuvadets, Anthony Canellas, Youssef Oulkhouir, Maurice Pérol, Anne-Claire Toffart, Sebastien Benzekry, Elisa Gobbini
2025. ⟨hal-05240613⟩
Journal articles The hospital sink drain biofilm resistome is independent of the corresponding microbiota, the environment and disinfection measures Aurélie Hennebique, Jostin Monge-Ruiz, Morgane Roger-Margueritat, Patrice Morand, Claire Terreaux-Masson, Max Maurin, Corinne Mercier, Caroline Landelle, Elena Buelow
Water Research, 2025, 284, pp.123902. ⟨10.1016/j.watres.2025.123902⟩. ⟨hal-05200256⟩
Journal articles A scaffold for quinone channeling between membrane and soluble bacterial oxidoreductases M. Broc, M. Cherrier, A. Uzel, R. Arias-Cartin, P. Arnoux, G. Brasseur, F. Seduk, B. Guigliarelli, P. Legrand, F. Pierrel, G. Schoehn, M. Maté, L. Martin, S. Grimaldi, Y. Nicolet, A. Magalon, A. Walburger
Nature Structural and Molecular Biology, 2025, ⟨10.1038/s41594-025-01607-4⟩. ⟨hal-05229188⟩
Conference papers Investigating the evolution of phototrophy in Pseudomonadota Timothée Salzat-Hervouette, Fatoumata Mangane, Sophie-Carole Chobert, Fabien Pierrel, Sophie S Abby
Mathematical and computational evolutionary biology, Mohamed Abdelaziz Mohamed; Olivier Gascuel; Stéphane Guindon; Guillermo Iglesias; Raphael Leblois; A. Jesús Muñoz Pajares; Pablo Gutiérrez de la Peña; Isabel Sanmartin; Céline Scornavacca, May 2025, Granada (Spain), Spain. ⟨hal-05123210⟩
Preprints, Working Papers, ... Cytosolic acetyl-CoA synthetase (ACSS2) does not generate butyryl- and crotonyl-CoA Nour Zeaiter, Laura Belot, Valérie Cunin, Roland Abi Nahed, Malgorzata Tokarska-Schlattner, Audrey Le Gouellec, Carlo Petosa, Saadi Khochbin, Uwe Schlattner
2025. ⟨hal-04982395⟩
Preprints, Working Papers, ... Multi-method quantification of acetyl-CoA and further acyl-CoA species in normal and ischemic rat liver Malgorzata Tokarska-Schlattner, Nour Zeaiter, Valérie Cunin, Stéphane Attia, Cécile Meunier, Laurence Kay, Amel Achouri, Edwige Hiriart-Bryant, Karine Couturier, Cindy Tellier, Abderrafek El Harras, Bénédicte Elena-Herrmann, Saadi Khochbin, Audrey Le Gouellec, Uwe Schlattner
2025. ⟨hal-04982407⟩
Preprints, Working Papers, ... OligoDOM: a T cell response enhancing platform applied to cancer immunotherapy Judith del Campo, Séverine Valsesia, Elsa Nikly, Ruiu Roberto, Antonella Iacoviello, Elena Quaglino, Federica Cavallo, Dalil Hannani, Emilie Boucher, Florence Liliane Nicolas, Alexandre Le Vert, Francesco Doro
2025. ⟨hal-04970529⟩
Poster communications Investigating the evolution of phototrophy in Pseudomonadota Timothée Salzat-Hervouette, Fatoumata Mangane, Sophie-Carole Chobert, Fabien Pierrel, Sophie S. Abby
BiGre Days, Feb 2025, Saint-Martin-D'Hères, France. ⟨hal-04970943⟩
Poster communications Investigating the evolution of phototrophy in Pseudomonadota Timothée Salzat-Hervouette, Fatoumata Mangane, Sophie-Carole Chobert, Fabien Pierrel, Sophie S. Abby
ALPHY-AIEM, Feb 2025, Villeurbane, France. ⟨hal-04970921⟩
Journal articles Sub-minimum inhibitory concentrations in ceftazidime exacerbate the formation of Acinetobacter baumannii biofilms Bipin Yadav, Anjali Jaiswal, Durgesh Kumar, Dilip Karad, Prashant Joshi, Dhanraj Kamble, Corinne Mercier, Arun Kharat
Microbial Pathogenesis, 2025, 199, pp.107229. ⟨10.1016/j.micpath.2024.107229⟩. ⟨hal-04901514⟩
Journal articles Dynamic quinone repertoire accompanied the diversification of energy metabolism in Pseudomonadota Sophie-Carole Chobert, Morgane Roger-Margueritat, Laura Flandrin, Safa Berraies, Christopher T. Lefèvre, Ludovic Pelosi, Ivan Junier, Nelle Varoquaux, Fabien Pierrel, Sophie Abby
The International Society of Microbiologial Ecology Journal, 2025, 19 (1), ⟨10.1093/ismejo/wrae253⟩. ⟨hal-04886577⟩
Journal articles A novel quinone biosynthetic pathway illuminates the evolution of aerobic metabolism Felix J Elling, Fabien Pierrel, Sophie-Carole Chobert, Sophie S Abby, Thomas W Evans, Arthur Reveillard, Ludovic Pelosi, Juliette Schnoebelen, Jordon D Hemingway, Ahcène Boumendjel, Kevin W Becker, Pieter Blom, Julia Cordes, Vinitra Nathan, Frauke Baymann, Sebastian Lücker, Eva Spieck, Jared R Leadbetter, Kai-Uwe Hinrichs, Roger E Summons, Ann Pearson
Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (8), pp.e2421994122. ⟨10.1073/pnas.2421994122⟩. ⟨hal-04679398v2⟩
Journal articles Biliary diffusion and antifungal activity of caspofungin and fluconazole in liver transplant recipients: A pilot study Cécile Garnaud, Thibaut Gelé, Elodie Gautier-Veyret, Agnès Bonadona, Thomas Lefebvre, Christelle Boglione-Kerrien, Françoise Stanke-Labesque, Jean-Pierre Gangneux, Françoise Botterel, Anne Hulin, Muriel Cornet
Journal of Medical Mycology = Journal de Mycologie Médicale, 2025, 35 (1), pp.101531. ⟨10.1016/j.mycmed.2024.101531⟩. ⟨hal-04997699⟩
Journal articles Acclimatized Lowlanders Exhibit a Hypocoagulable Profile after a Passive Ascent at High Altitude Emeric Stauffer, François Caton, Raphael Marlu, Aurélien Pichon, Landry Seyve, Michael Furian, Aymeric Paillisser, Florence Berquet, Jérémy de Abreu, Blandine Deschamps, Benoit Polack, Philippe Connes, Paul Robach, Stéphane Doutreleau, Julien Brugniaux, Samuel Verges, Benoit Champigneulle, Benoît Polack
High Altitude Medicine and Biology [High Altitude Medicine & Biology], 2024, ⟨10.1089/ham.2024.0128⟩. ⟨hal-04916827⟩
Theses Etude de l'origine et de la diversification des voies de biosynthèse des quinones respiratoires Sophie-Carole Chobert
Bio-Informatique, Biologie Systémique [q-bio.QM]. UGA (Université Grenoble Alpes), 2024. Français. ⟨NNT : ⟩. ⟨tel-04971170⟩
Poster communications Les siphons de lavabos et les eaux usées hospitalières : un réservoir pour les bactéries résistantes aux antibiotiques Aurélie Hennebique, Jostin Monge-Ruiz, Morgane Roger-Margueritat, Patrice Morand, Claire Terreaux-Masson, Nadia Kurtz, Jennifer Charbonnier, Max Maurin, Corinne Mercier, Caroline Landelle, Elena Buelow
44e RÉUNION INTERDISCIPLINAIRE DE CHIMIOTHÉRAPIE ANTI-INFECTIEUSE, Dec 2024, Paris, France. ⟨hal-04976955⟩
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