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Software MacSyLib Bertrand Néron, Sophie Abby, Eduardo Rocha
2025, ⟨swh:1:dir:ab0579d9d9fea3b32750df4ccd076ddde3bbce6a;origin=https://github.com/gem-pasteur/macsylib;visit=swh:1:snp:12363be7b9e43518ba1945d24152d3b89b915f6d;anchor=swh:1:rel:54d76b45afdc0bbf3178753ce34003442b2a9afc⟩. ⟨hal-05421770⟩
Poster communications Characterization of swine influenza virus infections in pig herds: A machine learning approach identifying key environmental, physiological, immunological and virological determinants Hellec Elisabeth, Richard Gautier, Hervé Séverine, Fablet Christelle, Bougeard Stéphanie, Thiroux Sarah, Deblanc Céline, Andraud Mathieu, Hirchaud Edouard, Lucas Pierrick, Fonseca Roselyne, Barbier Nicolas, Gorin Stéphane, Quéguiner Stéphane, Eveno Eric, Eono Florent, Poulain Gilles, Kerphérique Stéphane, Blanchard Yannick, Rose Nicolas, Simon Gaëlle
Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM), Jul 2025, Bordeaux, France. ⟨anses-05467801⟩
Journal articles Untargeted and semi-targeted metabolomics approach for profiling small intestinal and fecal metabolome using high-resolution mass spectrometry Alexandre Tronel, Morgane Roger-Margueritat, Caroline Plazy, Valérie Cunin, Ipsita Mohanty, Pieter Dorrestein, Thomas Soranzo, Audrey Le Gouellec
Metabolomics, 2025, 21 (4), pp.84. ⟨10.1007/s11306-025-02288-2⟩. ⟨hal-05467454⟩
Poster communications Study of the prebiotic properties of wood-hemicellulose oligosaccharides Niusha Safari, C. Chirat, Ingrid Couturier, Stéphanie Blanquet-Diot, Dalil Hannani, Bertrand Toussaint
Wallenberg Wood Science Center International Conference - WWSC, Jun 2025, Stockholm, Sweden. ⟨hal-05495636⟩
Journal articles Environmental and clinical impacts of antibiotics’ sub-minimum inhibitory concentrations on the development of resistance in acinetobacter baumannii Bipin Yadav, Dilip Karad, Kiran Kharat, Nilesh Makwana, Anjali Jaiswal, Richa Chawla, Meenakshi Mani, Hathorkhi Boro, Prashant Joshi, Dhanraj Kamble, Corinne Mercier, Arun Kharat
Science of the Total Environment, 2025, 979, pp.179521. ⟨10.1016/j.scitotenv.2025.179521⟩. ⟨hal-05467317⟩
Conference papers Investigating the evolution of phototrophy in Pseudomonadota Timothée Salzat-Hervouette, Fatoumata Mangane, Sophie-Carole Chobert, Sophie Abby, Fabien Pierrel
7ème Journée BacToGre, Sylvie Elsen; Pierre Marcoux; Sophie Abby, May 2025, Grenoble, France. ⟨hal-05123247⟩
Journal articles Tocilizumab-Based Treatment of Microvascular Inflammation in Kidney Transplant Recipients: A Retrospective Study Johan Noble, Giorgia Comai, Valeria Corredetti, Reda Laamech, Celine Dard, Thomas Jouve, Diane Giovannini, Audrey Le Gouellec, Shivani Wadnerkar, Paolo Cravedi, Della Apuzzo, Daniele Vetrano, Marco Busutti, Chiara Abenavoli, Paolo Malvezzi, Lionel Pe Rostaing, Gaetano Lamanna
Transplant International, 2025, 38, ⟨10.3389/ti.2025.14502⟩. ⟨hal-05467450⟩
Conference papers Investigating the evolution of phototrophy in Pseudomonadota Timothée Salzat-Hervouette, Fatoumata Mangane, Sophie-Carole Chobert, Fabien Pierrel, Sophie S Abby
Mathematical and computational evolutionary biology, Mohamed Abdelaziz Mohamed; Olivier Gascuel; Stéphane Guindon; Guillermo Iglesias; Raphael Leblois; A. Jesús Muñoz Pajares; Pablo Gutiérrez de la Peña; Isabel Sanmartin; Céline Scornavacca, May 2025, Granada (Spain), Spain. ⟨hal-05123210⟩
Journal articles Holo‐omics disentangle drought response and biotic interactions among plant, endophyte and pathogen Peilin Chen, Qingyi Yu, Cong Wang, Liliam Montoya, Patrick West, Ling Xu, Nelle Varoquaux, Benjamin Cole, Kim Hixson, Young‐mo Kim, Ling Liu, Baodan Zhang, Jie Zhang, Baiyang Li, Elizabeth Purdom, John Vogel, Christer Jansson, Robert Hutmacher, Jeffery Dahlberg, Devin Coleman-Derr, Peggy Lemaux, John Taylor, Cheng Gao
New Phytologist, 2025, 246 (6), pp.2702-2717. ⟨10.1111/nph.70155⟩. ⟨hal-05467384⟩
Preprints, Working Papers, ... Cytosolic acetyl-CoA synthetase (ACSS2) does not generate butyryl- and crotonyl-CoA Nour Zeaiter, Laura Belot, Valérie Cunin, Roland Abi Nahed, Malgorzata Tokarska-Schlattner, Audrey Le Gouellec, Carlo Petosa, Saadi Khochbin, Uwe Schlattner
2025. ⟨hal-04982395⟩
Preprints, Working Papers, ... Multi-method quantification of acetyl-CoA and further acyl-CoA species in normal and ischemic rat liver Malgorzata Tokarska-Schlattner, Nour Zeaiter, Valérie Cunin, Stéphane Attia, Cécile Meunier, Laurence Kay, Amel Achouri, Edwige Hiriart-Bryant, Karine Couturier, Cindy Tellier, Abderrafek El Harras, Bénédicte Elena-Herrmann, Saadi Khochbin, Audrey Le Gouellec, Uwe Schlattner
2025. ⟨hal-04982407⟩
Preprints, Working Papers, ... OligoDOM: a T cell response enhancing platform applied to cancer immunotherapy Judith del Campo, Séverine Valsesia, Elsa Nikly, Ruiu Roberto, Antonella Iacoviello, Elena Quaglino, Federica Cavallo, Dalil Hannani, Emilie Boucher, Florence Liliane Nicolas, Alexandre Le Vert, Francesco Doro
2025. ⟨hal-04970529⟩
Poster communications Investigating the evolution of phototrophy in Pseudomonadota Timothée Salzat-Hervouette, Fatoumata Mangane, Sophie-Carole Chobert, Fabien Pierrel, Sophie S. Abby
BiGre Days, Feb 2025, Saint-Martin-D'Hères, France. ⟨hal-04970943⟩
Poster communications Investigating the evolution of phototrophy in Pseudomonadota Timothée Salzat-Hervouette, Fatoumata Mangane, Sophie-Carole Chobert, Fabien Pierrel, Sophie S. Abby
ALPHY-AIEM, Feb 2025, Villeurbane, France. ⟨hal-04970921⟩
Journal articles Sub-minimum inhibitory concentrations in ceftazidime exacerbate the formation of Acinetobacter baumannii biofilms Bipin Yadav, Anjali Jaiswal, Durgesh Kumar, Dilip Karad, Prashant Joshi, Dhanraj Kamble, Corinne Mercier, Arun Kharat
Microbial Pathogenesis, 2025, 199, pp.107229. ⟨10.1016/j.micpath.2024.107229⟩. ⟨hal-04901514⟩
Journal articles Dynamic quinone repertoire accompanied the diversification of energy metabolism in Pseudomonadota Sophie-Carole Chobert, Morgane Roger-Margueritat, Laura Flandrin, Safa Berraies, Christopher T. Lefèvre, Ludovic Pelosi, Ivan Junier, Nelle Varoquaux, Fabien Pierrel, Sophie Abby
The International Society of Microbiologial Ecology Journal, 2025, 19 (1), ⟨10.1093/ismejo/wrae253⟩. ⟨hal-04886577⟩
Journal articles A novel quinone biosynthetic pathway illuminates the evolution of aerobic metabolism Felix J Elling, Fabien Pierrel, Sophie-Carole Chobert, Sophie S Abby, Thomas W Evans, Arthur Reveillard, Ludovic Pelosi, Juliette Schnoebelen, Jordon D Hemingway, Ahcène Boumendjel, Kevin W Becker, Pieter Blom, Julia Cordes, Vinitra Nathan, Frauke Baymann, Sebastian Lücker, Eva Spieck, Jared R Leadbetter, Kai-Uwe Hinrichs, Roger E Summons, Ann Pearson
Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (8), pp.e2421994122. ⟨10.1073/pnas.2421994122⟩. ⟨hal-04679398v2⟩
Journal articles Biliary diffusion and antifungal activity of caspofungin and fluconazole in liver transplant recipients: A pilot study Cécile Garnaud, Thibaut Gelé, Elodie Gautier-Veyret, Agnès Bonadona, Thomas Lefebvre, Christelle Boglione-Kerrien, Françoise Stanke-Labesque, Jean-Pierre Gangneux, Françoise Botterel, Anne Hulin, Muriel Cornet
Journal of Medical Mycology = Journal de Mycologie Médicale, 2025, 35 (1), pp.101531. ⟨10.1016/j.mycmed.2024.101531⟩. ⟨hal-04997699⟩
Journal articles OligoDOMTM: a T-cell response-enhancing platform applied to cancer immunotherapy Judith del Campo, Séverine Valsesia, Elsa Nikly, Roberto Ruiu, Antonella Iacoviello, Elena Quaglino, Federica Cavallo, Dalil Hannani, Emilie Boucher, Florence Nicolas, Alexandre Le Vert, Francesco Doro
Frontiers in Immunology, 2025, 16, pp.1549112. ⟨10.3389/fimmu.2025.1549112⟩. ⟨hal-05406114⟩
Journal articles Acclimatized Lowlanders Exhibit a Hypocoagulable Profile after a Passive Ascent at High Altitude Emeric Stauffer, François Caton, Raphael Marlu, Aurélien Pichon, Landry Seyve, Michael Furian, Aymeric Paillisser, Florence Berquet, Jérémy de Abreu, Blandine Deschamps, Benoit Polack, Philippe Connes, Paul Robach, Stéphane Doutreleau, Julien Brugniaux, Samuel Verges, Benoit Champigneulle, Benoît Polack
High Altitude Medicine and Biology [High Altitude Medicine & Biology], 2024, 26 (2), pp.209-214. ⟨10.1089/ham.2024.0128⟩. ⟨hal-04916827⟩
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