HAL publications access
Journal articles A Mouse Model of Mild Clostridioides difficile Infection for the Characterization of Natural Immune Responses Assaf Mizrahi, Gauthier Péan de Ponfilly, Diane Sapa, Antonia Suau, Irène Mangin, Aurélie Baliarda, Sandra Hoys, Benoît Pilmis, Sylvie Lambert, Anaïs Brosse, Alban Le Monnier
Microorganisms, 2024, 12 (10), pp.1933. ⟨10.3390/microorganisms12101933⟩. ⟨hal-04764178⟩
Journal articles DciA secures bidirectional replication initiation in Vibrio cholerae Amelie Besombes, Yazid Adam, Christophe Possoz, Ivan Junier, François–xavier Barre, Jean-Luc Ferat
ier Barre, et al.. DciA secures bidirectional replication initiation in Vibrio cholerae. Nucleic Acids Research, 2024, 52 (20), pp.12324 - 12333. ⟨10.1093/nar/gkae795⟩. ⟨hal-04778285⟩
Journal articles Easy-to-use imaging-cytometry assay to analyze chitin patterns in yeasts Delphine Aldebert, Bastien Suarez, François Bettega, Emilie Boucher, Cecile Garnaud, Muriel Cornet
Journal of Medical Mycology = Journal de Mycologie Médicale, 2024, 34 (3), pp.101493. ⟨10.1016/j.mycmed.2024.101493⟩. ⟨hal-04886599⟩
Journal articles Current knowledge and practice of Candida auris screening in France: A nationwide survey from the French Society of Medical Mycology (SFMM) J. Guitard, A.P. Bellanger, J. Dorin, S. Cassaing, A. Capitaine, F. Gabriel, M. Nicolas, N. Coron, P. Penn, M. Moniot, D. Quinio, S. Ranque, M. Sasso, P. Lepape, E. Dannaoui, S. Brun, C. Lacroix, M. Cornu, A. Debourgogne, M.F. Durieux, G. Laurent, V. Bru, N. Bourgeois, Kévin Brunet, K. Brunet, T. Chouaki, A. Huguenin, L. Hasseine, D. Maubon, J.P. Gangneux, N. Desbois-Nogard, S. Houze, F. Dalle, M.E. Bougnoux, A. Alanio, D. Costa, F. Botterel, C. Hennequin
Journal of Medical Mycology = Journal de Mycologie Médicale, 2024, 34 (3), pp.101490. ⟨10.1016/j.mycmed.2024.101490⟩. ⟨hal-04675511⟩
Preprints, Working Papers, ... A novel quinone biosynthetic pathway illuminates the evolution of aerobic metabolism Felix J Elling, Fabien Pierrel, Sophie-Carole Chobert, Sophie S Abby, Thomas W Evans, Arthur Reveillard, Ludovic Pelosi, Juliette Schnoebelen, Jordon D Hemingway, Ahcène Boumendjel, Kevin W Becker, Pieter Blom, Julia Cordes, Vinitra Nathan, Frauke Baymann, Sebastian Lücker, Eva Spieck, Jared R Leadbetter, Kai-Uwe Hinrichs, Roger E Summons, Ann Pearson
2024. ⟨hal-04679398v1⟩
Software MacSyFinder Bertrand Néron, Sophie Abby, Eduardo Rocha
2024, ⟨swh:1:dir:1e9ecd3b3b2bff278fac4b2814c56380c01853c9;origin=https://github.com/gem-pasteur/macsyfinder;visit=swh:1:snp:673748faa3f4f15687e2b6eb6d3d30b9eee9e68c;anchor=swh:1:rel:91c37f034f0348980547f788953425c0e490b8ea⟩. ⟨hal-04668349v2⟩
Journal articles The Epidemiological Investigation of Yersinia pestis , Francisella tularensis , and Arenavirus Infections in Small Mammals in Northwestern Iran Ehsan Mostafavi, Roya Mohammadpour, Saber Esmaeili, Ahmad Mahmoudi, Mostafa Salehi-Vaziri, Ahmad Ghasemi, Mahdi Rohani, Ali Mohammadi, Sana Eybpoosh, Neda Baseri, Christiane Denys, Max Maurin, Violaine Nicolas, Aude Lalis, Jean-Pierre Hugot
Vector Borne and Zoonotic Diseases, 2024, 24 (8), pp.489-498. ⟨10.1089/vbz.2023.0089⟩. ⟨hal-04677672⟩
Journal articles Azole resistance in Aspergillus flavus and associated fitness cost Elie Djenontin, Anne Debourgogne, Bita Mousavi, Laurence Delhaes, Muriel Cornet, Isabel Valsecchi, Makiath Adebo, Jacques Guillot, Françoise Botterel, Eric Dannaoui
Mycoses, 2024, 67 (7), pp.2169. ⟨10.1111/myc.13766⟩. ⟨hal-04997696⟩
Habilitation à diriger des recherches Immunothérapie des Cancers : Décryptage des mécanismes d’actions et Identification de biomarqueurs pour maximiser les réponses aux traitements Dalil Hannani
Immunologie. UGA (Université Grenoble Alpes), 2024. ⟨tel-04753901⟩
Poster communications PREDICTING BACTERIAL SECRETION SYSTEM PROTEINS USING POSITIVE AND UNLABELED MACHINE LEARNING Sandy Frank, Kwamou Ngaha, Renato Augusto Antoniassi Battistin, Sophie Abby, Nelle Varoquaux
JOBIM 2024, Jun 2024, Toulouse, France. ⟨hal-04975216⟩
Journal articles An ethically guided preclinical device for phenotyping H2 production in laboratory rodents Victor Pascal-Moussellard, Emilie Boucher, Stéphane Tanguy, Philippe Cinquin, Pierre‐alain Barraud, Chloé Davin, Cordélia Salomez-Ihl, Dalil Hannani, François Boucher, Jean‐pierre Alcaraz
Animal Model Exp Med / Animal models and experimental medicine., 2024, ⟨10.1002/ame2.12460⟩. ⟨hal-04634474⟩
Poster communications Long bacterial cell" phenotype in the Long-Term Evolution Experiment (LTEE) on Escherichia coli Koçak Arif, Monge-Ruiz Jostin, Antar Hammam M., Efilé-Lukumba Frémis, Aldebert Delphine, Hennebique Aurélie, Schaack Béatrice, Laurin David, Usson Yves, Maurin Max, Yamaryo-Botté Yoshiki, Jouhet Juliette, Botté Cyrille Y., Schneider Dominique, Hindré Thomas, Mercier Corinne
BactoGre 2024, Jun 2024, Saint-Martin d'Hères, France. ⟨hal-04977297⟩
Poster communications Dynamics of bacterial populations and their antibiotic resistance profiles in hospital wastewater from an intensive care unit Véréna Schmidt, Aurélie Hennebique, Jostin Monge-Ruiz, Claire Terreaux-Masson, Nadia Kurtz, Jennifer Charbonnier, Patrice Morand, Max Maurin, Corinne Mercier, Caroline Landelle, Elena Buelow
Bacto-Gre, Jun 2024, Grenoble, France. ⟨hal-04976950⟩
Conference papers Quinone exchanges in the gut microbiota Morgane Roger-Margueritat, Sophie-Carole Chobert, Sophie Abby, Fabien Pierrel
BactoGre 2024, Jun 2024, Grenoble, France. ⟨hal-04985447⟩
Poster communications A new evaluation of The Toxoplasma ELITe MGB assay on the ELITe InGenius™ platform (ELITechGroup) Marie-Pierre Brenier-Pinchart, Cécile Garnaud, Gaelle Dewaele, Florent Saragosa, Marie Gladys Robert, Hélène Fricker-Hidalgo, Hervé Pelloux
Congrès des Sociétés Françaises de Parasitologie (SFP) et de Mycologie médicale (SFMM), Jun 2024, Angers (FR), France. ⟨hal-04955758⟩
Conference papers Diagnostic and therapeutic difficulties of implantation mycoses Muriel Cornet
Congrès des Sociétés Françaises de Parasitologie et de Mycologie Médicale, Sociétés Françaises de Parasitologie et de Mycologie Médicale, Jun 2024, Angers, France. ⟨hal-04997676⟩
Journal articles Structural Reconstruction of E. coli Ubi Metabolon Using an AlphaFold2-Based Computational Framework Romain Launay, Sophie-Carole Chobert, Sophie S Abby, Fabien Pierrel, Isabelle André, Jérémy Esque
Journal of Chemical Information and Modeling, 2024, 64 (13), pp.5175-5193. ⟨10.1021/acs.jcim.4c00304⟩. ⟨hal-04662598⟩
Journal articles Dramatic increase in antimicrobial resistance in ESKAPE clinical isolates over the 2010–2020 decade in India Arun Kharat, Nilesh Makwana, Mahfouz Nasser, Samarpita Gayen, Bipin Yadav, Durgesh Kumar, Balaji Veeraraghavan, Corinne Mercier
International Journal of Antimicrobial Agents, 2024, 63 (5), pp.107125. ⟨10.1016/j.ijantimicag.2024.107125⟩. ⟨hal-04886555⟩
Poster communications NGS-characterised infection with Dibothriocephalus latus after consumption of supermarket sushi, France Cascarano Estelle, Andreani Julien, Jardin Hugo, Andre Lydie, Larrat Sylvie, Garnaud Cécile, Pelloux Hervé, Robert Marie Gladys, Blanc Myriam
34th ECCMID (European Congress of Clinical Microbiology and Infectious Diseases), Apr 2024, Barcelona (ES), Spain. ⟨hal-04955790⟩
Poster communications A call to consider schistosomiasis in hepatitis B patients from endemic regions Palaprat Oriane, Brenier-Pinchart Marie-Pierre, Barthelon Justine, Hidalgo Hélène Fricker, Garnaud Cécile, Nemoz Benjamin, Larrat Sylvie, Lupo Julien, Pelloux Hervé, Hilleret Marie-Noëlle, Robert Marie Gladys
34th ECCMID (European Congress of Clinical Microbiology and Infectious Diseases), Apr 2024, Barcelona (ES), Spain. ⟨hal-04955775⟩
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