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Publications
TREE Team's publications
HAL publications access
Journal articles
Impact of bronchial colonization with Candida spp. on the risk of bacterial ventilator-associated pneumonia in the ICU: the FUNGIBACT prospective cohort study
Jean-François Timsit, Carole Schwebel, Lenka Styfalova, Muriel Cornet, Philippe Poirier, Christiane Forestier, Stephane Ruckly, Marie-Christine Jacob, Bertrand Souweine
Intensive Care Medicine, 2019, 45 (6), pp.834-843. ⟨10.1007/s00134-019-05622-0⟩. ⟨hal-02305027⟩
Journal articles
Plasticity of Promoter-Core Sequences Allows Bacteria to Compensate for the Loss of a Key Global Regulatory Gene
Otmane Lamrabet, Jacqueline A Plumbridge, Mikaël Martin, Richard Lenski, Dominique Schneider, Thomas Hindré
Molecular Biology and Evolution, 2019, 36 (6), pp.1121-1133. ⟨10.1093/molbev/msz042⟩. ⟨hal-02283119⟩
Poster communications
Optimisation de l'intervalle thérapeutique du posaconazole et de l'isavuconazole pour un suivi thérapeutique pharmacologique efficace
Theo Willeman, Julia Tonini, Cécile Garnaud, Sébastien Bailly, Peggy Gandia, Françoise Stanke-Labesque, Danièle Maubon, Elodie Gautier-Veyret
Congrès des Sociétés Françaises de Parasitologie (SFP) et de Mycologie médicale (SFMM), May 2019, Tours, France. ⟨hal-04957020⟩
Poster communications
Diagnostic moléculaire de la toxoplasmose chez les patients immunodéprimés : évaluation de l’extraction automatisée de l’ADN par eMAG® sur 3 types de prélèvements artificiels
Fanny Zhao, Lionnel Bulin, Hélène Fricker-Hidalgo, Quentin Renaud, Marie Gladys Robert, Cécile Garnaud, Hervé Pelloux, Marie-Pierre Brenier-Pinchart
Congrès des Sociétés Françaises de Parasitologie (SFP) et de Mycologie médicale (SFMM), May 2019, Tours, France. ⟨hal-04957006⟩
Journal articles
Toxoplasma Hypervirulence in the Rat Model Parallels Human Infection and Is Modulated by the Toxo1 Locus
Corinne Loeuillet, Anais Mondon, Salima Kamche, Véronique Curri, Jean Boutonnat, Pierre Cavailles, Marie-France Cesbron-Delauw
Frontiers in Cellular and Infection Microbiology, 2019, 9, ⟨10.3389/fcimb.2019.00134⟩. ⟨hal-02117147⟩
Journal articles
Hepatic Brucelloma Diagnosis and Long-Term Treatment, France
Marie Amsilli, Olivier Epaulard, Jean-Paul Brion, Patricia Pavese, Christian Letoublon, Isabelle Pelloux, Max Maurin
Emerging Infectious Diseases, 2019, 25 (5), pp.1021-1023. ⟨10.3201/eid2505.180613⟩. ⟨hal-04997803⟩
Journal articles
Changes in Intrinsic Antibiotic Susceptibility during a Long-Term Evolution Experiment with Escherichia coli
Otmane Lamrabet, Mikaël Martin, Richard Lenski, Dominique Schneider
mBio, 2019, 10 (2), ⟨10.1128/mBio.00189-19⟩. ⟨hal-02283128⟩
Poster communications
Molecular diagnosis of toxoplasmosis in immunocompromised patients : evaluation of automated DNA extraction using eMAG®
Fanny Zhao, Lionnel Bulin, Hélène Fricker-Hidalgo, Quentin Renaud, Marie Gladys Robert, Cécile Garnaud, Hervé Pelloux, Marie-Pierre Brenier-Pinchart
29th ECCMID (European Congress of Clinical Microbiology and Infectious Diseases), Apr 2019, Amsterdam, Netherlands. ⟨hal-04957052⟩
Journal articles
The dense granule protein 8 (GRA8) is a component of the sub-pellicular cytoskeleton in Toxoplasma gondii
Rubén Darío Díaz-Martín, Corinne Mercier, Carmen Gómez de León, Ricardo Mondragón González, Sirenia González Pozos, Emmanuel Ríos-Castro, Raúl Arguello García, Barbara Fox, David Bzik, Ricardo Mondragón Flores
Parasitology Research, 2019, 118 (6), pp.1899-1918. ⟨10.1007/s00436-019-06298-7⟩. ⟨hal-04818600⟩
Journal articles
Molecular-Type Specific Multiplex PCR produces a distinct VNII PCR pattern among Cryptococcus neoformans species complex
Massimo Cogliati, Mala Rakoto Andrianarivelo, Mohamed Ellabib, Emmanuel Nnadi, Muriel Cornet
Medical Mycology, 2019, 57 (3), pp.384-386. ⟨10.1093/mmy/myy022⟩. ⟨hal-04997898⟩
Theses
Approche métabolomique pour l'étude de l'évolution adaptative de Pseudomonas aeruginosa au cours des infections pulmonaires chroniques dans la mucoviscidose
Oriane Moyne
Pneumologie et système respiratoire. Université Grenoble Alpes, 2019. Français. ⟨NNT : 2019GREAS003⟩. ⟨tel-02402547⟩
Conference papers
Biosynthesis of Ubiquinone without 02: how and why?
Fabien Pierrel
«EVOLUTION, BIOGENESIS AND DYNAMICS OF ENERGY TRANSDUCING MEMBRANES», LABEX DYNAMO, Mar 2019, Paris, France. ⟨hal-04931615⟩
Journal articles
Prealbumin, platelet factor 4 and S100A12 combination at baseline predicts good response to TNF alpha inhibitors in rheumatoid arthritis
Minh Vu Chuong Nguyen, Athan Baillet, Xavier Romand, Candice Trocme, Anaïs Courtier, Hubert Marotte, Thierry Thomas, Martin Soubrier, Pierre Miossec, Jacques Tebib, Laurent Grange, Bertrand Toussaint, Thierry Lequerré, Olivier Vittecoq, Philippe Gaudin
Joint Bone Spine, 2019, 86 (2), pp.195-201. ⟨10.1016/j.jbspin.2018.05.006⟩. ⟨hal-02416032⟩
Journal articles
Prevalence, geographic risk factor, and development of a standardized protocol for fungal isolation in cystic fibrosis: Results from the international prospective study “MFIP”
Laurence Delhaes, Kada Touati, Muriel Cornet, Rafael Cantón, Françoise Botterel, Eric Dannaoui, Florent Morio, Patrice Le Pape, Frédéric Grenouillet, Loïc Favennec, Solene Le Gal, Gilles Nevez, Alain Duhamel, Andrew M Borman, Veroniek Saegeman, Katrien Lagrou, Elia Gomez, Maiz-Luis Carro, Odile Faure-Cognet, Silvia Campana, Walter Buzina, Sharon Chen, Wieland Meyer, Emmanuel Roilides, Maria Simitsopoulou, Esther Manso, Lisa Cariani, Arianna Biffi, Ersilia Fiscarelli, Gabriella Ricciotti, Marc Pihet, Jean-Philippe Bouchara
Journal of Cystic Fibrosis, 2019, 18 (2), pp.212-220. ⟨10.1016/j.jcf.2018.10.001⟩. ⟨hal-02316590⟩
Journal articles
A proliferation‐inducing ligand–mediated anti‐inflammatory response of astrocytes in multiple sclerosis
Laurie Baert, Mahdia Benkhoucha, Natalia Popa, Mashal C Ahmed, Benoit Manfroi, Jean Boutonnat, Nathalie Sturm, Gilda Raguenez, Marine Tessier, Olivier Casez, Romain Marignier, Mitra Ahmadi, Alexis Broisat, Catherine Ghezzi, Cyril Rivat, Corinne Sonrier, Michael Hahne, Dominique L. Baeten, Romain R Vivès, Hugues Lortat-Jacob, Patrice N. Marche, Pascal Schneider, Hans P Lassmann, José Boucraut, Patrice H Lalive, Bertrand Huard
Annals of Neurology, 2019, 85 (3), pp.406-420. ⟨10.1002/ana.25415⟩. ⟨inserm-02332844⟩
Journal articles
Bacterial genome architecture shapes global transcriptional regulation by DNA supercoiling
Bilal El houdaigui, Raphaël Forquet, Thomas Hindré, Dominique Schneider, William Nasser, Sylvie Reverchon, Sam Meyer
Nucleic Acids Research, 2019, 47 (11), pp.5648-5657. ⟨10.1093/nar/gkz300⟩. ⟨hal-02127001⟩
Journal articles
Ubiquinone Biosynthesis over the Entire O2 Range: Characterization of a Conserved O2-Independent Pathway
Ludovic Pelosi, Chau-Duy-Tam Vo, Sophie Saphia Abby, Laurent Loiseau, Bérengère Rascalou, Mahmoud Hajj Chehade, Bruno Faivre, Mathieu Goussé, Clothilde Chenal, Nadia Touati, Laurent Binet, David Cornu, Cameron David Fyfe, Marc Fontecave, Frédéric Barras, Murielle Lombard, Fabien Pierrel
mBio, 2019, 10 (4), ⟨10.1128/mBio.01319-19⟩. ⟨hal-02183791⟩
Journal articles
Reducing the ionizing radiation background does not significantly affect the evolution of Escherichia coli populations over 500 generations
Nathanael Lampe, Pierre Marin, Marianne Coulon, Pierre Micheau, Lydia Maigne, David Sarramia, Fabrice Piquemal, Sébastien Incerti, David Biron, Camille Ghio, Télesphore Sime-Ngando, Thomas Hindré, Vincent Breton
Scientific Reports, 2019, 9 (1), pp.14891. ⟨10.1038/s41598-019-51519-9⟩. ⟨hal-02337251⟩
Book sections
The X-CGD PLB-985 Cell Model for NOX2 Structure-Function Analysis
Sylvain Beaumel, Marie José Stasia
Ulla G. Knaus; Thomas L. Leto. NADPH Oxidases: Methods and Protocols, Methods in Molecular Biology, 1982, Springer Nature, 2019, Methods Molecular Biology, 978-1-4939-9423-6. ⟨hal-02082119⟩
Journal articles
Fibrinography: A Multiwavelength Light-Scattering Assay of Fibrin Structure
Carhel Dassi, Landry Seyve, Xabel Garcia, Emmanuelle Bigo, François Caton, Benoit Polack
HemaSphere, 2019, 3 (1), pp.e166. ⟨10.1097/HS9.0000000000000166⟩. ⟨hal-02406331⟩
HAL publications access
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