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Journal articles Non-linear frequency-dependent selection promotes long-term coexistence between bacteria species Noémie Harmand, Valentine Federico, Thomas Hindre, Thomas Lenormand
Ecology Letters, 2019, 22, pp.1192-1202. ⟨10.1111/ele.13276⟩. ⟨hal-02099952⟩
Journal articles Structural and functional studies of the metalloregulator Fur identify a promoter-binding mechanism and its role in Francisella tularensis virulence J. Pérard, S. Nader, M. Levert, L Arnaud, P. Carpentier, C. Siebert, F. Blanquet, C. Cavazza, P. Renesto, D. Schneider, M. Maurin, Jacques Covès, S. Crouzy, Isabelle Michaud-Soret
Communications Biology, 2018, 1 (1), ⟨10.1038/s42003-018-0095-6⟩. ⟨hal-02975690⟩
Journal articles Integrating anatomo‐physiological changes and pharmacogenomics in anti‐infective therapy management: is it a major concern? Laura Beaumier, Sébastien Chanoine, Elodie Gautier-Veyret, Hélène Pluchart, Muriel Cornet, Marie‐pierre Brenier-Pinchart, Xavier Fonrose, Boubou Camara, Pierrick Bedouch
British Journal of Clinical Pharmacology, 2018, 85 (1), pp.263-265. ⟨10.1111/bcp.13785⟩. ⟨hal-04760870⟩
Patents Method for the in vitro detection of strains of Legionella pneumophila resistant to antibiotics Max Maurin, Dominique Schneider, Lubana Shadoud, Sophie Jarraud, Jean Francois Timsit, Jerome Etienne
France, Patent n° : US 10106858 B2 - US Patent App. 15/564,105. 2018. ⟨hal-02283240⟩
Journal articles Oral administration of viable Bifidobacterium pseudolongum strain Patronus modified colonic microbiota and increased mucus layer thickness in rat Irène Mangin, Flore Marques Dossou-Yovo, Christophe Lévêque, Marie-Vincent Dessoy, Olivier Sawoo, Antonia Suau, Philippe Pochart
FEMS Microbiology Ecology, 2018, 94 (11), ⟨10.1093/femsec/fiy177⟩. ⟨hal-01980169⟩
Journal articles High-content imaging assay to evaluate Toxoplasma gondii infection and proliferation: A multiparametric assay to screen new compounds Bastien Touquet, Léonie Pelissier, Pierre Cavailles, Wei Yi, Valeria Bellini, Corinne Mercier, Marie-France Cesbron-Delauw, Ahcène Boumendjel, Delphine Aldebert
PLoS ONE, 2018, 13 (8), pp.e0201678. ⟨10.1371/journal.pone.0201678⟩. ⟨hal-02007242⟩
Journal articles Robust Frankia phylogeny, species delineation and intraspecies diversity based on Multi-Locus Sequence Analysis (MLSA) and Single-Locus Strain Typing (SLST) adapted to a large sample size Adrien C Pozzi, Hector Bautista-Guerrero, Sophie S. Abby, Aude P Herrera-Belaroussi, Danis Abrouk, Philippe Normand, Frédéric Menu, Maria P Fernandez
Systematic and Applied Microbiology, 2018, 41 (4), pp.311-323. ⟨10.1016/j.syapm.2018.03.002⟩. ⟨hal-02313880⟩
Patents Implantable intestinal reactor Philippe Cinquin, Dominique Schneider, Max Maurin, Donald K Martin, Sarra El Ichi, Abdelkader Zebda, Jean-Pierre Alcaraz, Fabian Reche, Patrick Tuvignon, Jacques Thélu, Audrey Legouëllec, Bertrand Toussaint
France, Patent n° : US20180078746A1. 2018. ⟨hal-02010238⟩
Journal articles Killed but metabolically active Pseudomonas aeruginosa -based vaccine induces protective humoral- and cell-mediated immunity against Pseudomonas aeruginosa pulmonary infections Elodie Meynet, David Laurin, Jean Luc Lenormand, Boubou Camara, Bertrand Toussaint, Audrey Le Gouëllec
Vaccine, 2018, 36 (14), pp.1893-1900. ⟨10.1016/j.vaccine.2018.02.040⟩. ⟨hal-03012574⟩
Journal articles Identification of Protein Secretion Systems in Bacterial Genomes Using MacSyFinder. Sophie S. Abby, Eduardo P C Rocha
Methods in Molecular Biology, 2018, Bacterial protein secretion systems, 1615, pp.1-21. ⟨10.1007/978-1-4939-7033-9_1⟩. ⟨hal-01677379⟩
Journal articles Universal and idiosyncratic characteristic lengths in bacterial genomes Ivan Junier, Paul Frémont, Olivier Rivoire
Physical Biology, 2018, 15 (3), pp.035001. ⟨10.1088/1478-3975/aab4ac⟩. ⟨hal-01972786⟩
Journal articles Mild malformations of cortical development in sleep-related hypermotor epilepsy due to KCNT1 mutations G Rubboli, G Plazzi, F Picard, L Nobili, Edouard Hirsch, Jameleddine Chelly, R Prayson, J Boutonnat, M Bramerio, P Kahane, L Dibbens, E Gardella, S Baulac, R Moller
Annals of Clinical and Translational Neurology, 2018, 6 (2), pp.386-391. ⟨10.1002/acn3.708⟩. ⟨hal-03698383⟩
Journal articles Molecular dissection of engraftment in a xenograft model of myelodysplastic syndromes Meunier Mathieu, Charles Dussiau, Natacha Mauz, Anne-Sophie Alary, Christine Lefebvre, Gautier Szymanski, Mylène Pezet, Françoise Blanquet, Olivier Kosmider, Sophie Park
Oncotarget, 2018, 9 (19), pp.14993-15000. ⟨10.18632/oncotarget.24538⟩. ⟨hal-04770250⟩
Poster communications Application de la PCR digitale à la détection et à la quantification de la résistance aux fluoroquinolones chez Legionella pneumophila Aurélie Hennebique, Marie Bidart, Jarraud S, Beraud Laeticia, Carole Schwebel, Max Maurin, Sandrine Boisset
37ème Réunion Interdisciplinaire de Chimiothérapie Anti-Infectieuse, Dec 2017, Paris, France. ⟨hal-04976956⟩
Book sections Modeling Bacterial DNA: Simulation of Self-avoiding Supercoiled Worm-Like Chains Including Structural Transitions of the Helix Thibaut Lepage, Ivan Junier
The Bacterial Nucleoid, 2017. ⟨hal-01655027⟩
Journal articles Genetic Basis of Exploiting Ecological Opportunity During the Long-Term Diversification of a Bacterial Population Jessika Consuegra, Jessica Plucain, Joël Gaffé, Thomas Hindré, Dominique Schneider
Journal of Molecular Evolution, 2017, 85 (1-2), pp.26 - 36. ⟨10.1007/s00239-017-9802-z⟩. ⟨hal-01653588⟩
Journal articles The UbiK protein is an accessory factor necessary for bacterial ubiquinone (UQ) biosynthesis and forms a complex with the UQ biogenesis factor UbiJ Laurent Loiseau, Cameron Fyfe, Laurent Aussel, Mahmoud Hajj Chehade, Sara B. Hernández, Bruno Faivre, Djemel Hamdane, Caroline Mellot-Draznieks, Bérengère Rascalou, Ludovic Pelosi, Christophe Velours, David Cornu, Murielle Lombard, Josep Casadesús, Fabien Pierrel, Marc Fontecave, Frédéric Barras
Journal of Biological Chemistry, 2017, 292 (28), pp.11937 - 11950. ⟨10.1074/jbc.M117.789164⟩. ⟨hal-01615493⟩
Journal articles Isee-resistance : using in silico experimental evolution to sensitize providers on antibiotic resistance Guillaume Beslon, Dominique Schneider
Antimicrobial Resistance and Infection Control, 2017, Abstracts from the 4th International Conference on Prevention & Infection Control (ICPIC 2017), 6(Suppl 3) (52), pp.2. ⟨hal-01569262⟩
Poster communications Application de la PCR digitale à la détection et à la quantification de la résistance aux fluoroquinolones chez Legionella pneumophila Aurélie Hennebique, Marie Bidart, Sophie Jarraud, Laetitia Beraud, Carole Schwebel, Max Maurin, Sandrine Boisset
n et à la quantification de la résistance aux fluoroquinolones chez Legionella pneumophila. Journée de la Recherche Médicale de Grenoble, Jun 2017, Grenoble, France. ⟨hal-04960106⟩
Journal articles Beware batch culture: Seasonality and niche construction predicted to favor bacterial adaptive diversification Charles Rocabert, Carole Knibbe, Jessika Consuegra, Dominique Schneider, Guillaume Beslon
PLoS Computational Biology, 2017, 13 (3), e1005459 (32 p.). ⟨10.1371/journal.pcbi.1005459.s006⟩. ⟨hal-01508751⟩
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