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Journal articles Isee-resistance : using in silico experimental evolution to sensitize providers on antibiotic resistance Guillaume Beslon, Dominique Schneider
Antimicrobial Resistance and Infection Control, 2017, Abstracts from the 4th International Conference on Prevention & Infection Control (ICPIC 2017), 6(Suppl 3) (52), pp.2. ⟨hal-01569262⟩
Poster communications Application de la PCR digitale à la détection et à la quantification de la résistance aux fluoroquinolones chez Legionella pneumophila Aurélie Hennebique, Marie Bidart, Sophie Jarraud, Laetitia Beraud, Carole Schwebel, Max Maurin, Sandrine Boisset
n et à la quantification de la résistance aux fluoroquinolones chez Legionella pneumophila. Journée de la Recherche Médicale de Grenoble, Jun 2017, Grenoble, France. ⟨hal-04960106⟩
Journal articles Beware batch culture: Seasonality and niche construction predicted to favor bacterial adaptive diversification Charles Rocabert, Carole Knibbe, Jessika Consuegra, Dominique Schneider, Guillaume Beslon
PLoS Computational Biology, 2017, 13 (3), e1005459 (32 p.). ⟨10.1371/journal.pcbi.1005459.s006⟩. ⟨hal-01508751⟩
Patents Attenuated strains of Pseudomonas aeruginosa as vaccine Meynet Elodie, Jean Luc Lenormand, Bertrand Toussaint, David Laurin, Audrey Le Gouellec
France, Patent n° : EP17305173.1. 2017. ⟨hal-02002858⟩
Journal articles The COQ2 genotype predicts the severity of coenzyme Q 10 deficiency Maria Andrea Desbats, Valeria Morbidoni, Micol Silic-Benussi, Mara Doimo, Vincenzo Ciminale, Matteo Cassina, Sabrina Sacconi, Michio Hirano, Giuseppe Basso, Fabien Pierrel, Placido Navas, Leonardo Salviati, Eva Trevisson
Human Molecular Genetics, 2017, 25 (19), pp.4256 - 4265. ⟨10.1093/hmg/ddw257⟩. ⟨hal-01635280⟩
Theses Ecological and molecular bases of adaptive diversification in Escherichia coli Jessika Consuegra Bonilla
Microbiology and Parasitology. Université Grenoble Alpes, 2016. English. ⟨NNT : 2016GREAV090⟩. ⟨tel-01626007⟩
Journal articles Contrasting effects of historical contingency on phenotypic and genomic trajectories during a two-step evolution experiment with bacteria Jessica Plucain, Antonia Suau, Stéphane Cruveiller, Claudine Médigue, Dominique Schneider, Mickael Le Gac
BMC Evolutionary Biology, 2016, 16 (1), ⟨10.1186/s12862-016-0662-8⟩. ⟨hal-01653387⟩
Reports EvoEvo Deliverable 6.8 Guillaume Beslon, Jonas Abernot, Santiago F. Elena, Dominique Schneider, Paulien Hogeweg, Susan Stepney, Christophe Rigotti
[Research Report] INRIA Grenoble - Rhône-Alpes. 2016. ⟨hal-01577187⟩
Journal articles Empirical Micafungin Treatment and Survival Without Invasive Fungal Infection in Adults With ICU-Acquired Sepsis, Candida Colonization, and Multiple Organ Failure Jean-Francois Timsit, Elie Azoulay, Carole Schwebel, Pierre Emmanuel Charles, Muriel Cornet, Bertrand Souweine, Kada Klouche, Samir Jaber, Jean-Louis Trouillet, Fabrice Bruneel, Laurent Argaud, Joel Cousson, Ferhat Meziani, Didier Gruson, Adeline Paris, Michael Darmon, Maité Garrouste-Orgeas, Jean-Christophe Navellou, Arnaud Foucrier, Bernard Allaouchiche, Vincent Das, Jean-Pierre Gangneux, Stéphane Ruckly, Daniele Maubon, Vincent Jullien, Michel Wolff
JAMA Cardiology, 2016, 316 (15), pp.1555. ⟨10.1001/jama.2016.14655⟩. ⟨hal-03703121⟩
Patents Réacteur intestinal implantable Philippe Cinquin, Dominique Schneider, Max Maurin, Donald K Martin, Sarra El Ichi, Abdelkader Zebda, Jean-Pierre Alcaraz, Fabian Reche, Patrick Tuvignon
France, Patent n° : FR3034307. 2016. ⟨hal-02010289⟩
Reports EvoEvo Deliverable 1.5 Dominique Schneider, Guillaume Beslon, José-Luis Carrasco, Santiago F. Elena, Otmane Lamrabet, A. Willemsen
. [Research Report] INRIA Grenoble - Rhône-Alpes. 2016. ⟨hal-01577130⟩
Reports EvoEvo Deliverable 1.6 Dominique Schneider, Guillaume Beslon, Santiago F. Elena, Otmane Lamrabet
. [Research Report] INRIA Grenoble - Rhône-Alpes. 2016. ⟨hal-01577131⟩
Journal articles Mechanistic Details of Early Steps in Coenzyme Q Biosynthesis Pathway in Yeast Laurie-Anne Payet, Mélanie Leroux, John  C. Willison, Akio Kihara, Ludovic Pelosi, Fabien Pierrel
Cell Chemical Biology, 2016, 23 (10), pp.1241 - 1250. ⟨10.1016/j.chembiol.2016.08.008⟩. ⟨hal-01424510⟩
Conference papers In Silico Experimental Evolution Highlights the Influence of Environmental Seasonality on Bacterial Diversification Charles Rocabert, Carole Knibbe, Jessika Consuegra, Dominique Schneider, Guillaume Beslon
2nd EvoEvo Workshop, satellite workshop of CCS2016, Sep 2016, Amsterdam, Netherlands. ⟨hal-01375677⟩
Journal articles Evolution of Ubiquinone Biosynthesis: Multiple Proteobacterial Enzymes with Various Regioselectivities To Catalyze Three Contiguous Aromatic Hydroxylation Reactions Ludovic Pelosi, Anne-Lise Ducluzeau, Laurent Loiseau, Frédéric Barras, Dominique Schneider, Ivan Junier, Fabien Pierrel
mSystems, 2016, 1 (4), pp.00091-16. ⟨10.1128/mSystems.00091-16⟩. ⟨hal-01424513⟩
Journal articles Metabolic modelling in a dynamic evolutionary framework predicts adaptive diversification of bacteria in a long-term evolution experiment. Tobias Grosskopf, Jessica Consuegra, Joël Gaffé, John Willison, Richard E Lenski, Orkun S. Soyer, Dominique Schneider
BMC Evolutionary Biology, 2016, 16 (1), pp.163. ⟨10.1186/s12862-016-0733-x⟩. ⟨hal-01360095⟩
Journal articles Tempo and mode of genome evolution in a 50,000-generation experiment Olivier Tenaillon, Jeffrey E. Barrick, Noah Ribeck, Daniel E. Deatherage, Jeffrey L. Blanchard, Aurko Dasgupta, Gabriel C. Wu, Sébastien Wielgoss, Stéphane Cruveiller, Claudine Médigue, Dominique Schneider, Richard E. Lenski
Nature, 2016, 536 (7615), pp.165 - 170. ⟨10.1038/nature18959⟩. ⟨hal-01653393⟩
Journal articles Phenotypes Associated with Knockouts of Eight Dense Granule Gene Loci (GRA2-9) in Virulent Toxoplasma gondii. Leah M Rommereim, Valeria Bellini, Barbara A Fox, Graciane Pètre, Camille Rak, Bastien Touquet, Delphine Aldebert, Jean-François Dubremetz, Marie-France Cesbron-Delauw, Corinne Mercier, David J Bzik
PLoS ONE, 2016, 11 (7), pp.e0159306. ⟨10.1371/journal.pone.0159306⟩. ⟨hal-01539047⟩
Patents Réacteur intestinal implantable P. Cinquin, Dominique Schneider, Max Maurin, Donald K Martin, Sarra El Ichi, A Zebda, Jean-Pierre Alcaraz, Fabian Reche, Patrick Tuvignon, Jacques Thélu, Audrey Legouëllec, Bertrand Toussaint
France, N° de brevet: n° WO 2016/156612 A1. 2016. ⟨hal-02010232⟩
Journal articles Insights into the Mechanisms of Basal Coordination of Transcription Using a Genome-Reduced Bacterium Ivan Junier, E. besray Unal, Eva Yus, Verónica Lloréns-Rico, Luis Serrano
Cell Systems, 2016, 2 (6), pp.391 - 401. ⟨10.1016/j.cels.2016.04.015⟩. ⟨hal-01653839⟩
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