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    Homepage > Research > Teams > TREE > Publications
    TREE Team's publications

    Publications

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    Keywords

    • evolution
    • microorganisms
    • genomics
    • microbiota
    • membranes
    • antimicrobial resistance
    • metabolism
    • therapeutic and diagnostic engineering
    • immunity
    • evolution
    • microorganisms
    • genomics
    • microbiota
    • membranes
    • antimicrobial resistance
    • metabolism
    • therapeutic and diagnostic engineering
    • immunity
    HAL publications access
    Poster communications Development of a sdAb based radiotracer targeting murine Tissue Factor for atherothrombosis imaging Laurent Dumas, Charlotte Lombardi, Charlotte Lombardi, Timo W M de Groof, Florian Raes, Mitra Ahmadi, Seyve Landry, Sandrine Bacot, Clémence André, Marlène Debiossat, Raphaël Marlu, Jean-Luc Lenormand, Sophie Hernot, Daniel Fagret, Nick Devoogdt, Catherine Ghezzi, Alexis Broisat
    lopment of a sdAb based radiotracer targeting murine Tissue Factor for atherothrombosis imaging. Journée de la Recherche Médicale de Grenoble, Jun 2024, Grenoble, France. ⟨hal-05290749⟩
    Poster communications Long bacterial cell" phenotype in the Long-Term Evolution Experiment (LTEE) on Escherichia coli Koçak Arif, Monge-Ruiz Jostin, Antar Hammam M., Efilé-Lukumba Frémis, Aldebert Delphine, Hennebique Aurélie, Schaack Béatrice, Laurin David, Usson Yves, Maurin Max, Yamaryo-Botté Yoshiki, Jouhet Juliette, Botté Cyrille Y., Schneider Dominique, Hindré Thomas, Mercier Corinne
    BactoGre 2024, Jun 2024, Saint-Martin d'Hères, France. ⟨hal-04977297⟩
    Poster communications Dynamics of bacterial populations and their antibiotic resistance profiles in hospital wastewater from an intensive care unit Véréna Schmidt, Aurélie Hennebique, Jostin Monge-Ruiz, Claire Terreaux-Masson, Nadia Kurtz, Jennifer Charbonnier, Patrice Morand, Max Maurin, Corinne Mercier, Caroline Landelle, Elena Buelow
    Bacto-Gre, Jun 2024, Grenoble, France. ⟨hal-04976950⟩
    Conference papers Quinone exchanges in the gut microbiota Morgane Roger-Margueritat, Sophie-Carole Chobert, Sophie Abby, Fabien Pierrel
    BactoGre 2024, Jun 2024, Grenoble, France. ⟨hal-04985447⟩
    Poster communications A new evaluation of The Toxoplasma ELITe MGB assay on the ELITe InGenius™ platform (ELITechGroup) Marie-Pierre Brenier-Pinchart, Cécile Garnaud, Gaelle Dewaele, Florent Saragosa, Marie Gladys Robert, Hélène Fricker-Hidalgo, Hervé Pelloux
    Congrès des Sociétés Françaises de Parasitologie (SFP) et de Mycologie médicale (SFMM), Jun 2024, Angers (FR), France. ⟨hal-04955758⟩
    Conference papers Diagnostic and therapeutic difficulties of implantation mycoses Muriel Cornet
    Congrès des Sociétés Françaises de Parasitologie et de Mycologie Médicale, Sociétés Françaises de Parasitologie et de Mycologie Médicale, Jun 2024, Angers, France. ⟨hal-04997676⟩
    Journal articles Structural Reconstruction of E. coli Ubi Metabolon Using an AlphaFold2-Based Computational Framework Romain Launay, Sophie-Carole Chobert, Sophie S Abby, Fabien Pierrel, Isabelle André, Jérémy Esque
    Journal of Chemical Information and Modeling, 2024, 64 (13), pp.5175-5193. ⟨10.1021/acs.jcim.4c00304⟩. ⟨hal-04662598⟩
    Journal articles Dramatic increase in antimicrobial resistance in ESKAPE clinical isolates over the 2010–2020 decade in India Arun Kharat, Nilesh Makwana, Mahfouz Nasser, Samarpita Gayen, Bipin Yadav, Durgesh Kumar, Balaji Veeraraghavan, Corinne Mercier
    International Journal of Antimicrobial Agents, 2024, 63 (5), pp.107125. ⟨10.1016/j.ijantimicag.2024.107125⟩. ⟨hal-04886555⟩
    Poster communications NGS-characterised infection with Dibothriocephalus latus after consumption of supermarket sushi, France Cascarano Estelle, Andreani Julien, Jardin Hugo, Andre Lydie, Larrat Sylvie, Garnaud Cécile, Pelloux Hervé, Robert Marie Gladys, Blanc Myriam
    34th ECCMID (European Congress of Clinical Microbiology and Infectious Diseases), Apr 2024, Barcelona (ES), Spain. ⟨hal-04955790⟩
    Poster communications A call to consider schistosomiasis in hepatitis B patients from endemic regions Palaprat Oriane, Brenier-Pinchart Marie-Pierre, Barthelon Justine, Hidalgo Hélène Fricker, Garnaud Cécile, Nemoz Benjamin, Larrat Sylvie, Lupo Julien, Pelloux Hervé, Hilleret Marie-Noëlle, Robert Marie Gladys
    34th ECCMID (European Congress of Clinical Microbiology and Infectious Diseases), Apr 2024, Barcelona (ES), Spain. ⟨hal-04955775⟩
    Conference papers Computational characterization and understanding of protein assemblies: the case of the Escherichia coli Ubi metabolon involved in ubiquinone biosynthesis Romain Launay, Sophie-Carole Chobert, Elin Teppa, Sophie S. Abby, Fabien Pierrel, Isabelle André, Jérémy Esque
    AMMIB, Apr 2024, Saclay, France. ⟨hal-04783578⟩
    Journal articles Development, Strategies, and Challenges for Tularemia Vaccine Safoura Moradkasani, Max Maurin, Amir Salek Farrokhi, Saber Esmaeili
    Current Microbiology, 2024, 81 (5), pp.126. ⟨10.1007/s00284-024-03658-0⟩. ⟨hal-04997721⟩
    Journal articles Are coagulation profiles in Andean highlanders with excessive erythrocytosis favouring hypercoagulability? Benoit Champigneulle, François Caton, Landry Seyve, Émeric Stauffer, Aurélien Pichon, Julien Brugniaux, Michael Furian, Ivan Hancco, Blandine Deschamps, Lars Kaestner, Paul Robach, Philippe Connes, Pierre Bouzat, Benoit Polack, Raphael Marlu, Samuel Verges
    Experimental Physiology, 2024, 109 (6), pp.899-914. ⟨10.1113/EP091670⟩. ⟨hal-04820265⟩
    Journal articles Features of cryptococcosis among 652 HIV-seronegative individuals in France: a cross-sectional observational study (2005-2020) Olivier Paccoud, Marie Desnos-Ollivier, Florence Persat, Magalie Demar, Karine Boukris-Sitbon, Anne-Pauline Bellanger, Julie Bonhomme, Christine Bonnal, Françoise Botterel, Marie-Elisabeth Bougnoux, Sophie Brun, Sophie Cassaing, Estelle Cateau, Taieb Chouaki, Muriel Cornet, Eric Dannaoui, Nicole Desbois-Nogard, Marie-Fleur Durieux, Loïc Favennec, Arnaud Fekkar, Frederic Gabriel, Jean-Pierre Gangneux, Juliette Guitard, Lilia Hasseine, Antoine Huguenin, Solène Le Gal, Valérie Letscher-Bru, Caroline Mahinc, Florent Morio, Muriel Nicolas, Philippe Poirier, Stéphane Ranque, Gabrielle Roosen, Célia Rouges, Anne-Laure Roux, Milène Sasso, Alexandre Alanio, Olivier Lortholary, Fanny Lanternier, The French Mycoses Study Group
    Clinical Microbiology and Infection, 2024, 30 (7), pp.937-944. ⟨10.1016/j.cmi.2024.03.031⟩. ⟨hal-04528767⟩
    Journal articles An organic O donor for biological hydroxylation reactions Katayoun Kazemzadeh Ferizhendi, Philippe Simon, Ludovic Pelosi, Emmanuel Séchet, Roache Arulanandam, Mahmoud Hajj Chehade, Martial Rey, Deniz Onal, Laura Flandrin, Rouba Chreim, Bruno Faivre, Samuel Chau-Duy-Tam Vo, Rodrigo Arias-Cartin, Frédéric Barras, Marc Fontecave, Emmanuelle Bouveret, Murielle Lombard, Fabien Pierrel
    Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (13), pp.e2321242121. ⟨10.1073/pnas.2321242121⟩. ⟨pasteur-04665824⟩
    Conference papers Development of a sdAb-based radiotracer targeting murine Tissue Factor for atherothrombosis imaging Laurent Dumas, Charlotte Lombardi, Timo W M de Groof, Florian Raes, Mitra Ahmadi, Sandrine Bacot, Clémence André, Marlène Debiossat, Raphaël Marlu, Jean-Luc Lenormand, Sophie Hernot, Daniel Fagret, Nick Devoogdt, Catherine Ghezzi, Alexis Broisat
    European Molecular Imaging Meeting, Mar 2024, Porto (Portugal), Portugal. ⟨hal-05290590⟩
    Conference papers Diversity of Quinones in Pseudomonadota: Focus on Ubiquinone biosynthesis and physiology under anaerobic conditions Fabien Pierrel
    Bacterial Electron Transfer processes and their regulation, European Federation of Biotechnology, Mar 2024, Alicante (SPAIN), Spain. ⟨hal-04931621⟩
    Journal articles Acetyl-CoA synthetase (ACSS2) does not generate butyryl- and crotonyl-CoA Nour Zeaiter, Laura Belot, Valérie Cunin, Roland Abi Nahed, Malgorzata Tokarska-Schlattner, Audrey Le Gouellec, Carlo Petosa, Saadi Khochbin, Uwe Schlattner
    Molecular metabolism, 2024, 81, pp.101903. ⟨10.1016/j.molmet.2024.101903⟩. ⟨hal-04731057⟩
    Journal articles Molecular detection of Coxiella burnetii in tick and blood samples from small ruminants in northwest of Iran Ahmad Enferadi Ghazanabad, Negin Esfandiari, Mohammadreza Najafi, Shahryar Mehrabi, Saeedeh Sarani, Peyman Khademi, Max Maurin
    Experimental and Applied Acarology, 2024, 92 (3), pp.529-546. ⟨10.1007/s10493-023-00888-y⟩. ⟨hal-04997896⟩
    Journal articles A single-domain antibody for the detection of pathological Tau protein in the early stages of oligomerization Nicolas de Leiris, Pascale Perret, Charlotte Lombardi, Bülent Gözel, Sabine Chierici, Philippe Millet, Marlène Debiossat, Sandrine Bacot, Benjamin B Tournier, Patrick Chames, Jean-Luc Lenormand, Catherine Ghezzi, Daniel Fagret, Marcelle Moulin
    Journal of Translational Medicine, 2024, 22 (1), pp.163. ⟨10.1186/s12967-024-04987-1⟩. ⟨hal-04583802⟩
    HAL publications access

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