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Publications
TREE Team's publications
HAL publications access
Journal articles
Multiscale Dynamic Structuring of Bacterial Chromosomes
Virginia Lioy, Ivan Junier, Frédéric Boccard
Annual Review of Microbiology, 2021, 75 (1), ⟨10.1146/annurev-micro-033021-113232⟩. ⟨hal-03335214⟩
Journal articles
Allosteric inhibition of HER2 by Moesin-mimicking compounds targets HER2-positive cancers and brain metastases
Camille Faure, Rym Djerbi-Bouillié, Anaïs Domingot, Haniaa Bouzinba-Segard, Saïd Taouji, Yanis Saidi, Sandra Bernard, Floriane Carallis, Romy Rothe-Walther, Jean-Luc Lenormand, Eric Chevet, Sandrine Bourdoulous
Cancer Research, 2021, 81 (21), pp.5464-5476. ⟨10.1158/0008-5472.CAN-21-0162⟩. ⟨hal-03361201⟩
Journal articles
Mediation of Interleukin‐23 and Tumor Necrosis Factor–Driven Reactive Arthritis by Chlamydia ‐Infected Macrophages in SKG Mice
Xavier Romand, Xiao Liu, M. Arifur Rahman, Zaied Ahmed Bhuyan, Claire Douillard, Reena Arora Kedia, Nathan Stone, Dominique Roest, Zi Huai Chew, Amy Cameron, Linda Rehaume, Aurélie Bozon, Mohammed Habib, Charles Armitage, Minh Vu Chuong Nguyen, Bertrand Favier, Kenneth Beagley, Max Maurin, Philippe Gaudin, Ranjeny Thomas, Timothy Wells, Athan Baillet
Arthritis & rheumatology, 2021, 73 (7), pp.1200-1210. ⟨10.1002/art.41653⟩. ⟨hal-03839613⟩
Journal articles
What We Know So Far about the Metabolite-Mediated Microbiota-Intestinal Immunity Dialogue and How to Hear the Sound of This Crosstalk
Clément Caffaratti, Caroline Plazy, Geoffroy Mery, Abdoul-Razak Tidjani, Federica Fiorini, Sarah Thiroux, Bertrand Toussaint, Dalil Hannani, Audrey Le Gouellec
Metabolites, 2021, 11 (6), pp.406. ⟨10.3390/metabo11060406⟩. ⟨hal-03267221⟩
Journal articles
MALDI-TOF MS in a Medical Mycology Laboratory: On Stage and Backstage
Marie-Gladys Robert, Muriel Cornet, Aurélie Hennebique, Tahinamandranto Rasamoelina, Yvan Caspar, Léa Pondérand, Marie Bidart, Harmonie Durand, Marvin Jacquet, Cécile Garnaud, Danièle Maubon
Microorganisms, 2021, 9 (6), pp.1283. ⟨10.3390/microorganisms9061283⟩. ⟨hal-03419699⟩
Journal articles
High-resolution melting PCR assay as a powerful tool for the epidemiological surveillance of tularemia in Western Europe
Maëllys Kevin, Guillaume Girault, Yvan Caspar, Moulay Ali Cherfa, Christiane Mendy, Max Maurin, Claire Ponsart, Nora Madani
Infection, Genetics and Evolution, 2021, 90, pp.104741. ⟨10.1016/j.meegid.2021.104741⟩. ⟨hal-03839600⟩
Journal articles
Genome-resolved metagenomics reveals role of iron metabolism in drought-induced rhizosphere microbiome dynamics
Ling Xu, Zhaobin Dong, Dawn Chiniquy, Grady Pierroz, Siwen Deng, Cheng Gao, Spencer Diamond, Tuesday Simmons, Heidi M.-L. Wipf, Daniel Caddell, Nelle Varoquaux, Mary Madera, Robert Hutmacher, Adam Deutschbauer, Jeffery Dahlberg, Mary Lou Guerinot, Elizabeth Purdom, Jillian Banfield, John Taylor, Peggy Lemaux, Devin Coleman-Derr
Nature Communications, 2021, 12 (1), ⟨10.1038/s41467-021-23553-7⟩. ⟨hal-03375808⟩
Journal articles
Genomes of Thaumarchaeota from deep sea sediments reveal specific adaptations of three independently evolved lineages
Melina Kerou, Rafael Ponce-Toledo, Rui Zhao, Sophie S. Abby, Miho Hirai, Hidetaka Nomaki, Yoshihiro Takaki, Takuro Nunoura, Steffen Jørgensen, Christa Schleper
The International Society of Microbiologial Ecology Journal, 2021, 15 (9), pp.2792-2808. ⟨10.1038/s41396-021-00962-6⟩. ⟨hal-03365290⟩
Journal articles
Serum IRAP, a Novel Direct Biomarker of Prediabetes and Type 2 Diabetes?
Candice Trocmé, Nicolas Gonnet, Margaux Di Tommaso, Hanen Samouda, Jean-Luc Cracowski, Claire Cracowski, Stéphanie Lambert-Porcheron, Martine Laville, Estelle Nobécourt, Chiraz Gaddhab, Allan Le Lay, Torsten Bohn, Christine Poitou, Karine Clément, Fahd Al-Mulla, Milad Bitar, Serge Bottari
Frontiers in Molecular Biosciences, 2021, 7, ⟨10.3389/fmolb.2020.596141⟩. ⟨hal-04009484⟩
Journal articles
Amoebae can promote the survival of Francisella species in the aquatic environment
Aurélie Hennebique, Julien Peyroux, Camille Brunet, Amandine Martin, Thomas Henry, Masa Knezevic, Marina Santic, Sandrine Boisset, Max Maurin
Emerging microbes & infections, 2021, ⟨10.1080/22221751.2021.1885999⟩. ⟨hal-03132662⟩
Journal articles
Ultrasound-stimulated Brownian ratchet enhances diffusion of molecules retained in hydrogels
Faezeh Gerayeli, Nawel Khalef, Aziz Bakri, Philippe Benech, Donald Martin
Nanomedicine: Nanotechnology, Biology and Medicine, 2021, 31, pp.102308. ⟨10.1016/j.nano.2020.102308⟩. ⟨hal-02987851⟩
Journal articles
Tularemia as a Mosquito-Borne Disease
Zakaria Abdellahoum, Max Maurin, Idir Bitam
Microorganisms, 2021, 9 (1), pp.26. ⟨10.3390/microorganisms9010026⟩. ⟨hal-03839620⟩
Journal articles
Structural and functional analysis of the Francisella lysine decarboxylase as a key actor in oxidative stress resistance
Jan Felix, Claire Siebert, Juila Novion Ducassou, Jérôme Nigou, Pierre Simon Garcia, Angélique Fraudeau, Karine Huard, Caroline Mas, Celine Brochier-Armanet, Yohann Couté, Irina Gutsche, Patricia Renesto
Scientific Reports, 2021, 11 (1), pp.972. ⟨10.1038/s41598-020-79611-5⟩. ⟨hal-03118173⟩
Book sections
Computational tools for the multiscale analysis of Hi-C data in bacterial chromosomes
Nelle Varoquaux, Virginia S Lioy, Frédéric Boccard, Ivan Junier
Hi-C Data Analysis, 2301, Springer US, pp.197-207, 2021, Methods in Molecular Biology, ⟨10.1007/978-1-0716-1390-0_10⟩. ⟨hal-03375884⟩
Journal articles
Cell-free expression of the outer membrane protein OprF of $Pseudomonas\ aeruginosa$ for vaccine purposes
Géraldine Mayeux, Landry Gayet, Lavinia Liguori, Marine Odier, Donald Martin, Sandra Cortès, Béatrice Schaack, Jean-Luc Lenormand
Life Science Alliance, 2021, 4 (6), pp.e202000958. ⟨10.26508/lsa.202000958⟩. ⟨hal-03358640⟩
Journal articles
Dynamics of the compartmentalized Streptomyces chromosome during metabolic differentiation
Virginia S Lioy, Jean-Noel Lorenzi, Soumaya Najah, Thibault Poinsignon, Herve Leh, Corinne Saulnier, Bertrand Aigle, Sylvie Lautru, Annabelle Thibessard, Olivier Lespinet, Pierre Leblond, Yan Jaszczyszyn, Kevin Gorrichon, Nelle Varoquaux, Ivan Junier, Frédéric Boccard, Jean-Luc Pernodet, Stéphanie G. Bury-Moné
Nature Communications, 2021, 12, pp.5221. ⟨10.1038/s41467-021-25462-1⟩. ⟨hal-03128776v2⟩
Journal articles
Metabotypes of Pseudomonas aeruginosa Correlate with Antibiotic Resistance, Virulence and Clinical Outcome in Cystic Fibrosis Chronic Infections
Oriane Moyne, Florence Castelli, Dominique J. Bicout, Julien Boccard, Boubou Camara, Benoit Cournoyer, Eric Faudry, Samuel Terrier, Dalil Hannani, Sarah Huot-Marchand, Claire Léger, Max Maurin, Tuan-Dung Ngo, Caroline Plazy, Robert Quinn, Ina Attrée, François Fenaille, Bertrand Toussaint, Audrey Le Gouëllec
Metabolites, 2021, 11 (2), ⟨10.3390/metabo11020063⟩. ⟨hal-03146820⟩
Journal articles
Complement alternative and mannose-binding lectin pathway activation is associated with COVID-19 mortality
Federica Defendi, Corentin Leroy, Olivier Epaulard, Giovanna Clavarino, Antoine Vilotitch, Marion Le Marechal, Marie-Christine Jacob, Tatiana Raskovalova, Martine Pernollet, Audrey Le Gouellec, Jean-Luc Bosson, Pascal Poignard, Matthieu Roustit, Nicole Thielens, Chantal Dumestre-Pérard, Jean-Yves Cesbron
Frontiers in Immunology, 2021, 12, pp.742446. ⟨10.3389/fimmu.2021.742446⟩. ⟨hal-03341868⟩
Journal articles
Mucormycosis in intensive care unit: surgery is a major prognostic factor in patients with hematological malignancy
Johanna Claustre, Romaric Larcher, Thomas Jouve, Anne-Sophie Truche, Saad Nseir, Julien Cadiet, Yoann Zerbib, Alexandre Lautrette, Jean-Michel Constantin, Pierre-Emmanuel Charles, Cedric Daubin, Remi Coudroy, Jean Dellamonica, Laurent Argaud, Pierre Phelouzat, Damien Contou, Juliette Pocquet, Guillaume Voiriot, Jean-Christophe Navellou, Pierre Lavagne, Michel Durand, Muriel Cornet, Carole Schwebel, Nicolas Terzi
Annals of Intensive Care, 2020, 10 (1), pp.74. ⟨10.1186/s13613-020-00673-9⟩. ⟨hal-03703151⟩
Journal articles
Clinical aspects of previously treated chromoblastomycosis: A case series from Madagascar
Fandresena Arilala Sendrasoa, Naina Harinjara Razanakoto, Mendrika Fifaliana Rakotoarisaona, Malalaniaina Andrianarison, Onivola Raharolahy, Tahinamandranto Rasamoelina, Irina Mamisoa Ranaivo, Moril Sata, Volatantely Ratovonjanahary, Danièle Maubon, Mala Rakoto Andrianarivelo, Muriel Cornet, Lala Soavina Ramarozatovo, Fahafahantsoa Rapelanoro Rabenja
International Journal of Infectious Diseases, 2020, 101, pp.228-232. ⟨10.1016/j.ijid.2020.09.1479⟩. ⟨hal-03703141⟩
HAL publications access
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