HAL publications access
Journal articles Sputum handling for rheology Lydia Esteban Enjuto, Matthieu Robert de Saint Vincent, Max Maurin, Bruno Degano, Hugues Bodiguel
Scientific Reports, 2023, 13 (1), pp.7695. ⟨10.1038/s41598-023-34043-9⟩. ⟨hal-04832031⟩
Journal articles Successional adaptive strategies revealed by correlating arbuscular mycorrhizal fungal abundance with host plant gene expression Cheng Gao, Pierre-Emmanuel Courty, Nelle Varoquaux, Benjamin Cole, Liliam Montoya, Ling Xu, Elizabeth Purdom, John Vogel, Robert Hutmacher, Jeffery Dahlberg, Devin Colemann-Derr, Peggy Lemaux, John Taylor
Molecular Ecology, 2023, 32 (10), pp.2674-2687. ⟨10.1111/mec.16343⟩. ⟨hal-03375810⟩
Poster communications Monitoring antibiotic resistant pathogens in hospital sinks and wastewater biofilms by culture-independent techniques versus conventional culturing methods Aurélie Hennebique, Jostin Monge-Ruiz, Caroline Landelle, Claire Terreaux-Masson, Jennifer Charbonnier, Max Maurin, Corinne Mercier, Elena Buelow
33rd European Congress of Clinical Microbiology & Infectious Diseases, Apr 2023, Copenhague, Denmark. ⟨hal-04961364⟩
Journal articles Spatial heterogeneity for APRIL production by eosinophils in the small intestine Nathalie Sturm, Morgane Roger-Margueritat, Fabien Pierrel, Philippe Lehours, Muriel Genevay, Bertrand Huard
Journal of Leukocyte Biology, 2023, 113 (4), pp.376-382. ⟨10.1093/jleuko/qiad014⟩. ⟨hal-04213714⟩
Journal articles MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes Bertrand Néron, Rémi Denise, Charles Coluzzi, Marie Touchon, Eduardo P.C. Rocha, Sophie Abby
Peer Community Journal, 2023, 3, pp.e28. ⟨10.24072/pcjournal.250⟩. ⟨pasteur-04060331v2⟩
Journal articles Stimulation of the immune system by a tumor antigen-bearing adenovirus-inspired VLP allows control of melanoma growth Solène Besson, Emilie Boucher, David Laurin, Olivier Manches, Caroline Aspord, Dalil Hannani, Pascal Fender
Molecular Therapy - Methods and Clinical Development, 2023, 28, pp.76-89. ⟨10.1016/j.omtm.2022.12.003⟩. ⟨hal-03969612⟩
Conference papers What will Metabolomics bring to the medicine of tomorrow Audrey Le Gouellec
BIOMEDJ, Mar 2023, Paris, France. ⟨hal-04958141⟩
Journal articles Lack of the human choline transporter‐like protein SLC44A2 causes hearing impairment and a rare red blood phenotype Bérengère Koehl, Cédric Vrignaud, Mahmoud Mikdar, Thankam Nair, Lucy Yang, Seyve Landry, Guy Laiguillon, Claudine Giroux-Lathuile, Sophie Anselme-Martin, Hanane El Kenz, Olivier Hermine, Narla Mohandas, Jean Pierre Cartron, Yves Colin, Olivier Detante, Raphaël Marlu, Caroline Le van Kim, Thomas Carey, Slim Azouzi, Thierry Peyrard
EMBO Molecular Medicine, 2023, 15 (3), ⟨10.15252/emmm.202216320⟩. ⟨hal-04090608⟩
Journal articles C-reactive protein and D-dimer in cerebral vein thrombosis: Relation to clinical and imaging characteristics as well as outcomes in a French cohort study Paul Billoir, Virginie Siguret, Elisabeth Masson Fron, Ludovic Drouet, Isabelle Crassard, Raphaël Marlu, Marianne Barbieux-Guillot, Pierre-Emmanuel Morange, Emmanuelle Robinet, Catherine Metzger, Valérie Wolff, Elisabeth André-Kerneis, Frédéric Klapczynski, Brigitte Martin-Bastenaire, Fernando Pico, Fanny Menard, Emmanuel Ellie, Geneviève Freyburger, François Rouanet, Hong-An Allano, Gaëlle Godenèche, Guillaume Mourey, Thierry Moulin, Micheline Berruyer, Laurent Derex, Catherine Trichet, Gwénaëlle Runavot, Agnès Le Querrec, Fausto Viader, Sophie Cluet-Dennetiere, Thomas Tarek Husein, Magali Donnard, Francisco Macian-Montoro, Catherine Ternisien, Benoît Guillon, Sophie Laplanche, Mathieu Zuber, Jean-Yves Peltier, Philippe Tassan, Bertrand Roussel, Sandrine Canaple, Emilie Scavazza, Nicolas Gaillard, Aude Triquenot Bagan, Véronique Le Cam Duchez
Research and Practice in Thrombosis and Haemostasis, 2023, 7 (3), pp.100130. ⟨10.1016/j.rpth.2023.100130⟩. ⟨hal-04083689⟩
Journal articles What clinical metabolomics will bring to the medicine of tomorrow Audrey Le Gouellec, Caroline Plazy, Bertrand Toussaint
Frontiers in Analytical Science, 2023, 3, ⟨10.3389/frans.2023.1142606⟩. ⟨hal-04886238⟩
Journal articles Inulin prebiotic reinforces host cancer immunosurveillance via ɣδ T cell activation Emilie Boucher, Caroline Plazy, Mathias L Richard, Antonia Suau, Irène Mangin, Muriel Cornet, Delphine Aldebert, Bertrand Toussaint, Dalil Hannani
Frontiers in Immunology, 2023, 14, pp 1104224. ⟨10.3389/fimmu.2023.1104224⟩. ⟨hal-04075792⟩
Journal articles Leveraging a powerful allogeneic dendritic cell line towards neoantigen-based cancer vaccines Dalil Hannani, Estelle Leplus, Karine Laulagnier, Laurence Chaperot, Joël Plumas
Genes and Cancer, 2023, 14, pp.3-11. ⟨10.18632/genesandcancer.229⟩. ⟨hal-04297113⟩
Conference papers Unraveling the relative emergence of quinones biosynthetic pathways Sophie-Carole Chobert, Ivan Junier, Fabien Pierrel, Sophie Abby
Rencontres Alhy/AIEM, Jan 2023, Grenoble, France. ⟨hal-04971115⟩
Journal articles Tumour-like breast lesions due to ectopic schistosomiasis in a European traveller Oriane Palaprat, Eleni Nika, Aurélie Delouche, Fanny Quenard, Maxime Chevalier, Danièle Maubon, Hervé Pelloux, Marie Robert
Journal of Travel Medicine, 2023, 30 (1), ⟨10.1093/jtm/taac067⟩. ⟨hal-04886195⟩
Preprints, Working Papers, ... Identification of protein secretion systems in bacterial genomes using MacSyFinder version 2 Sophie S. Abby, Rémi Denise, Eduardo Pc Rocha
2023. ⟨hal-04257010⟩
Journal articles Gradient concentration strip–specific epidemiological cut-off values of antifungal drugs in various yeast species and five prevalent Aspergillus species complexes Victor Mercier, Valérie Letscher-Bru, Marie-Elisabeth Bougnoux, Laurence Delhaes, Françoise Botterel, Danièle Maubon, Frédéric Dalle, Alexandre Alanio, Sandrine Houzé, Eric Dannaoui, Carole Cassagne, Sophie Cassaing, Marie-Fleur Durieux, Arnaud Fekkar, Jean-Philippe Bouchara, Jean-Pierre Gangneux, Julie Bonhomme, Damien Dupont, Damien Costa, Boualem Sendid, Taieb Chouaki, Nathalie Bourgeois, Antoine Huguenin, Sophie Brun, Caroline Mahinc, Lilia Hasseine, Solène Le Gal, Anne‐Pauline Bellanger, Eric Bailly, Florent Morio, Céline Nourrisson, Nicole Desbois-Nogard, Estelle Perraud, Anne Debourgogne, Hélène Yera, Laurence Lachaud, Milène Sasso
Clinical Microbiology and Infection, 2023, 29 (5), pp.652.e9-652.e15. ⟨10.1016/j.cmi.2022.11.030⟩. ⟨hal-03994435v2⟩
Journal articles Diversification of ubiquinone biosynthesis via gene duplications, transfers, losses, and parallel evolution Katayoun Kazemzadeh, Ludovic Pelosi, Clothilde Chenal, Sophie-Carole Chobert, Mahmoud Hajj Chehade, Margaux Jullien, Laura Flandrin, William Schmitt, Qiqi He, Emma Bouvet, Manon Jarzynka, Nelle Varoquaux, Ivan Junier, Fabien Pierrel, Sophie S. Abby
Molecular Biology and Evolution, 2023, 40 (10), pp.msad219. ⟨10.1093/molbev/msad219⟩. ⟨hal-04256893⟩
Journal articles A New Plasmacytoid Dendritic Cell-Based Vaccine in Combination with Anti-PD-1 Expands the Tumor-Specific CD8+ T Cells of Lung Cancer Patients Dalil Hannani, Estelle Leplus, David Laurin, Benjamin Caulier, Caroline Aspord, Natacha Madelon, Ekaterina Bourova-Flin, Christian Brambilla, Elisabeth Brambilla, Anne-Claire Toffart, Karine Laulagnier, Laurence Chaperot, Joël Plumas
International Journal of Molecular Sciences, 2023, 24 (3), pp.1897. ⟨10.3390/ijms24031897⟩. ⟨hal-04297039⟩
Book sections Unveiling the links between peptide identification and differential analysis FDR controls by means of a practical introduction to knockoff filters Lucas Etourneau, Nelle Varoquaux, Thomas Burger
Statistical Analysis of Proteomic Data, 2426, Springer US, pp.1-24, 2023, Methods in Molecular Biology, ⟨10.1101/2021.08.20.454134⟩. ⟨hal-03373565⟩
Journal articles Rapid and automated screening of carbapenemase- and ESBL-producing Gram-negative bacteria from rectal swabs using chromogenic agar media and the ScanStation device Julien Peyroux, Iyad Almahmoudh, Emelise Prebe-Coquerel, Thomas Girard, Max Maurin, Yvan Caspar
Microbiology Spectrum, 2023, 11 (5), pp.02723-23. ⟨10.1128/spectrum.02723-23⟩. ⟨hal-04631124⟩
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